Insertion junction: CLIP2.010544_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010544
Chromosome:chromosome 11
Location:1251753
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467695 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGCGGCGTCTGCAACATAGGGGGCAGGGGAGCAGGAGACAGAGACAG
Internal bar code:CCATGGTCGTTACATGGCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2005
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGTCAGTGCACCTTG
Suggested primer 2:CCATGAAGGCAGCCACACTA