Insertion junction: CLIP2.010549_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010549
Chromosome:chromosome 14
Location:1826121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619750 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGGACGACTGGCATGACAAGCGTGGCGGCACACGGGCACTCCTCCG
Internal bar code:CTGGCTCTTGTTGTGTTATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1969
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGTCTCCAGCAGTCTG
Suggested primer 2:GACGAACTGCTGGAGTTGGA