Insertion junction: CLIP2.010571_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010571
Chromosome:chromosome 12
Location:9091588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAGGTAGGACCGTCGTGGCGGCGCAGGTCAGTCAGGCTCCTCACGTA
Internal bar code:TCCGTGTCTCCGCGAAGAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1045
LEAP-Seq percent confirming:35.0877
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACCGGCGATGAGTCAAA
Suggested primer 2:TCAAGGCTGTTGCTCCGTAG