Insertion junction: CLIP2.010575_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010575
Chromosome:chromosome 4
Location:1230157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTGGGCCTCCGGACATGGACACACACGTACACACGCAACTGATTTT
Internal bar code:CTTCTTCAACGGTGCGAGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1995
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTTCAACCTTGCTGTGG
Suggested primer 2:CCCGTCTGATCCTCGAAAGG