Insertion junction: CLIP2.010579_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010579
Chromosome:chromosome 8
Location:2562210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCCGTCACCGCTCCTCCTCAGGCCCCTAAACCCTACAGGCCGTCACC
Internal bar code:ACCAAGTCGAATCCCGAAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCGACTGCCGATGAAG
Suggested primer 2:CATCAGCGGGGTAGTCATCC