Insertion junction: CLIP2.010579_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010579
Chromosome:chromosome 8
Location:2562210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGCAGGGGTGCCACGCGAGACGCGGCCATAGAGAGTCAAGGAGCAG
Internal bar code:GTTGAGTCTATAGCGAGTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2649
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAGCGGGGTAGTCATCC
Suggested primer 2:GGAGCGACTGCCGATGAAG