Insertion junction: CLIP2.010580_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010580
Chromosome:chromosome 11
Location:2698859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095071 (1 of 2) K01148 - poly(A)-specific ribonuclease (PARN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAGTGGGGGGGGGAGGGTTGCAAGGATTGGTACAGCGAAGTAGGGGG
Internal bar code:GGCAGGGTCGGGGGTAGGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:444
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGTCCAAATTCCCGTAA
Suggested primer 2:GCAAAGAGGGGAGTCCAGTC