Insertion junction: CLIP2.010582_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010582
Chromosome:chromosome 10
Location:6479405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465050 (1 of 1) PTHR19303//PTHR19303:SF285 - TRANSPOSON // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCTGGAACCATCGCAGGAAGATGACATTGTTCATGTACGCGTTGGC
Internal bar code:CATCAGGGTTTCAAAGTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2815
LEAP-Seq percent confirming:87.3303
LEAP-Seq n confirming:193
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:221

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGTGCTGGAACCTGGA
Suggested primer 2:AAGCCCTGCGTGATGTTCTT