Insertion junction: CLIP2.010597_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010597
Chromosome:chromosome 2
Location:519047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800166 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGAGGTCTTGTATTCATCGATGATGAACACATGCTTGGCGTAGCGCT
Internal bar code:TTCGACTATGCCCGGCCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2827
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTAGTGGTGATTGCCAGT
Suggested primer 2:TCAGTCGTCTAGGTCCAGCA