Insertion junction: CLIP2.010602_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010602
Chromosome:chromosome 2
Location:7159399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390356 (1 of 1) PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAAAGTTACGCGCGCTTGAACACGTACTACCAGCGGCCAGAAGGGGCA
Internal bar code:CGGTGGGTGGGCTACTGGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:829
LEAP-Seq percent confirming:29.6296
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACTGGAAGACCGGAC
Suggested primer 2:CGCGGAAATAGGCAAACCAG