Insertion junction: CLIP2.010606_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010606
Chromosome:chromosome 8
Location:428862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGGGCGAAGAGACGTGATGAGGGTGCAGTGATGAGAGTGGAGTAGGG
Internal bar code:TACTAAGTTCACTACGTTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCCGCTCCATTTGATTC
Suggested primer 2:CATTGAAGCCACCCCTCCAT