Insertion junction: CLIP2.010615_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010615
Chromosome:chromosome 4
Location:3017563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225050 (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGCCAAAGCGGGCCAGCTCACCATAAGGCAGGCCATCCAGCAGCGG
Internal bar code:TTATAGTGATTGGCCGGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1296
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACTTGCACCAAAACGGG
Suggested primer 2:GCTGAGAGCTGGGGAATGTT