Insertion junction: CLIP2.010620_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010620
Chromosome:chromosome 9
Location:465356
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800981 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACATTACGTGTGTCTACCGCGAGCTGGCACTACAACCACTGCAGGTG
Internal bar code:CGCGCCTGCGACTGCACGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:39.1304
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCCTTGCCCCAAGTGAT
Suggested primer 2:TGCCAGCTGATTGTACTGCA