Insertion junction: CLIP2.010632_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010632
Chromosome:chromosome 4
Location:2223762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00096549

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGTGCTGGCCTTCCGACAGTCGTTTGCTTGAACCCAGCTGTGCCGGA
Internal bar code:CAGTACTCGAATTGGAAACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2044
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAAAGTCCTCGAGGTT
Suggested primer 2:TGCGCCGCTAACGATAATCT