Insertion junction: CLIP2.010640_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010640
Chromosome:chromosome 7
Location:3525331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGACTGTAGGGTCGGTATCGGCGCGCGGTTTGTTGCGGACCGGCAGC
Internal bar code:GTCGCAAGGGTGGGGGTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGAAAAATGTGCGCTGT
Suggested primer 2:GTTGGGGTTTTCACGTGACG