Insertion junction: CLIP2.010641_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010641
Chromosome:chromosome 12
Location:5813675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533000 PHR2,PHR1 (1 of 3) K01669 - deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] (phrB); CPD photolyase, class II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTGGCTACGCCTTCACTTATTAATTAATCATGAATGTAAACCCCCCC
Internal bar code:CTAACCGTGGCAAACGCCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGCCCTTGTTGAACCGG
Suggested primer 2:CACACACACGCAGTTGAAGG