Insertion junction: CLIP2.010645_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010645
Chromosome:chromosome 8
Location:3475851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378750 CTAP7 Chloroplast translocon associated protein 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACCCTCCGCACACACGAGGCCGGTTTGCCCCCCCCCCTGGCTCAGTG
Internal bar code:TTCTTGTCTCGGAAAAGACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AAATTGTGCCCTGCCCGATA
Suggested primer 2:TCGCAGCTTGCAAACAGAAC