Insertion junction: CLIP2.010669_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010669
Chromosome:chromosome 1
Location:2016158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011100 CAS1 (1 of 1) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase; Terpenoid cylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGAAACTGCACGCGCACATCTCATTTGGCACTTGAGCAAGCACCATG
Internal bar code:ACTAAAGTGGGCAAGGTTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1659
LEAP-Seq percent confirming:62.2222
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTTGGACTGGGACTTGG
Suggested primer 2:GCCTGACGCACAGCAATATG