Insertion junction: CLIP2.010669_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010669
Chromosome:chromosome 1
Location:2016158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011100 CAS1 (1 of 1) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase; Terpenoid cylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGTCGGCGTCAGGCACGCCGCAGGGCCATTGCTGTACGCAGCAGAG
Internal bar code:ACTAAAGTGGGCAAGGTTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2967
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGACGCACAGCAATATG
Suggested primer 2:GGAGTTGGACTGGGACTTGG