Insertion junction: CLIP2.010669_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010669
Chromosome:chromosome 9
Location:5610937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAACAACCCCCCGCTCCCCCTCATCTTCCACCTCCCGACGACGAAAC
Internal bar code:TCGAGCGGATCCCTAACTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCAAATGCCTCCTCCAT
Suggested primer 2:CTGTCCAGAACCCGAACCTG