Insertion junction: CLIP2.010676_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010676
Chromosome:chromosome 3
Location:5535116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185050 FAP53,CFAP53 Flagellar Associated Protein 53; (1 of 1) PTHR31183:SF1 - COILED-COIL DOMAIN-CONTAINING PROTEIN 11 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTGCCACATGCGCTTCTCCTCGGCCTCCATGATCCGCTGCGCCATCT
Internal bar code:TAAATGAGGACTACCTCGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCGGGCCATACTTAGG
Suggested primer 2:ATCTTCAGGTCCAGCTCCCT