Insertion junction: CLIP2.010686_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010686
Chromosome:chromosome 3
Location:8406549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800399 (1 of 89) 3.6.4.13 - RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTGTGTATGTGTGCATGTGTGTGTGTGTAAAAGAGTACAAGGAAAAT
Internal bar code:TTACTTGCTTTAGCTGTGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGATGCAGCAAAGC
Suggested primer 2:GCAAAATCGCGCTCGGTATT