Insertion junction: CLIP2.010688_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010688
Chromosome:chromosome 6
Location:5521600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286650 DMT4,DMC4 (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGAGCCCGACGCCATTCTCCGCCCCCATGTATACGGAGCTGCCAAA
Internal bar code:GCAGTGTATATTGGCTAACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1084
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACACACACACACCAGG
Suggested primer 2:CTCTCCCCTCCCCACACATA