Insertion junction: CLIP2.010688_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010688
Chromosome:chromosome 6
Location:5521610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286650 DMT4,DMC4 (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCGCACAGTACGGTACAAGGAACGTGAAAGATAGGAAGGGGATGGC
Internal bar code:GCAGTGTATATTGGCTAACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCCCTCCCCACACATA
Suggested primer 2:AGTCACACACACACACCAGG