Insertion junction: CLIP2.010695_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010695
Chromosome:chromosome 7
Location:4594189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344200 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGTGCTGGCGTCATGAGTGATGTCAGGGGGTGGTGTGGGGGATCGC
Internal bar code:TTTGTCTGCATCAGTAGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGTATGCGATGCGTGTG
Suggested primer 2:TACGTCGGAGCGATAACGTG