Insertion junction: CLIP2.010698_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010698
Chromosome:chromosome 3
Location:3348442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166201 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGGGAGGTGCCGGCCTGGGTGCTGAAGCAGCACTTCAGGTTCCTGC
Internal bar code:TGAGCAGGAACACTGTGCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAGGGAATGAGGGGGAG
Suggested primer 2:GTGCATGACCCCCACATACA