Insertion junction: CLIP2.010701_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010701
Chromosome:chromosome 12
Location:5753567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532500 (1 of 2) K03453 - bile acid:Na+ symporter, BASS family (TC.BASS); Sodium:bile acid symporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATATCGCCTTTTGCGATGTACGCCACGATGTTGGAGGCGGTGCCTCCG
Internal bar code:AGTTTAGGTTTTAAGGGTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1994
LEAP-Seq percent confirming:77.5862
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGTCTTCACCAAGCAGT
Suggested primer 2:CGCCAATGCAACGTACTACG