Insertion junction: CLIP2.010715_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010715
Chromosome:chromosome 17
Location:71519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696350 (1 of 1) PTHR12454:SF11 - PROTEIN Y57A10A.10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCAATGGTGTCTCTCTCAAGGCCGATAGCAGCACTGCGAAGAACGGC
Internal bar code:GGTTCTATTCTGTGAATTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5464
LEAP-Seq percent confirming:89.2473
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGGCTGTAATACCTCCG
Suggested primer 2:GCACTAGATTTGCGAAGGCG