Insertion junction: CLIP2.010717_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010717
Chromosome:chromosome 7
Location:5216739
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g349100 HEL39 ATP-dependent RNA helicase; (1 of 1) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (DHX16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGACACAGACACTCCTTTGGCTTTTACTGATTCGCCTCCTACGGCGG
Internal bar code:CAATTGGGCTTATGAGTCAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:34.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGTGGCTGGAGCAAAG
Suggested primer 2:GGGCTCAAAGATCTTGGCCT