Insertion junction: CLIP2.010720_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010720
Chromosome:chromosome 16
Location:2513203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660601 (1 of 1) IPR000772//IPR003609 - Ricin B, lectin domain // PAN/Apple domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCATCAACCGTACGACCGGAGGGTGAGTGCGCAGGTGTGCAATACGC
Internal bar code:GCTGGTATGGATGCGGGGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2286
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGTAGTATTGCTGGCGC
Suggested primer 2:CCTTTTGGCCTCCGAAGAGT