Insertion junction: CLIP2.010720_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010720
Chromosome:chromosome 16
Location:2513203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660601 (1 of 1) IPR000772//IPR003609 - Ricin B, lectin domain // PAN/Apple domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCTGGCCATCGGAGGCGGGGTCACAGGGGAGCACCTGGGGCGTGAAG
Internal bar code:ATCGTTCAAATTACGCCGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTTGGCCTCCGAAGAGT
Suggested primer 2:CAACGTAGTATTGCTGGCGC