Insertion junction: CLIP2.010721_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010721
Chromosome:chromosome 9
Location:53080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800963 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAGAAGATGTGTTGCCTCCCGACACGCCTCTTATGTCGTTCCGCAAG
Internal bar code:ACGTTAATTGGTAATGGCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4302
LEAP-Seq percent confirming:30.9677
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:155

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGCGGTTGACTGAGTAA
Suggested primer 2:CGTTTCAGTTGTGCCCACTG