Insertion junction: CLIP2.010723_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010723
Chromosome:chromosome 13
Location:1130795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569500 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTCTCAAGGTTCGGGAAGTCGGCCGCAACCCAGGCGTCGGGGCCCT
Internal bar code:AAGATGGTAAGTATTGCAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3444
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGTATGAACGGGCAAG
Suggested primer 2:GGAGCACGAAGAGACAACCA