Insertion junction: CLIP2.010723_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010723
Chromosome:chromosome 13
Location:1130796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569500 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTCACCTGACGCCCGAGCACATCGCCGAGCTTGATGCAGCCGTGGAC
Internal bar code:AAGATGGTAAGTATTGCAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1877
LEAP-Seq percent confirming:67.5
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCACGAAGAGACAACCA
Suggested primer 2:CGCATGTATGAACGGGCAAG