Insertion junction: CLIP2.010727_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010727
Chromosome:chromosome 7
Location:6369214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACCACTACCGGCACACGCGCATGAGTCAACGCAGATGCACACATAC
Internal bar code:GCTTATTCCTTGTGTTTAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:221
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACATATGCCCCGACTC
Suggested primer 2:CCACTCCCTACTTGGCCTTG