Insertion junction: CLIP2.010729_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010729
Chromosome:chromosome 3
Location:6270461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191800 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGGTCAGTGCGTGGGCCCAGTGGTACCAGGAAAGTCAACAGGTACGG
Internal bar code:GGTGATCCGTGGTCGGACCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGTGGTATGTAGCTGTT
Suggested primer 2:AGCAATCAAGAGTCCCACCG