Insertion junction: CLIP2.010737_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010737
Chromosome:chromosome 3
Location:7717786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203600 GDP6,GDPD6 Glycerophosphoryl diester phosphodiesterase, probably a phospholipase C; (1 of 1) IPR000909//IPR017946//IPR030395 - Phosphatidylinositol-specific phospholipase C, X domain // PLC-like phosphodiesterase, TIM beta/alpha-barrel domain // Glycerophosphodiester phosphodiesterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAGCACCGCTCAGCCTCCTGCCCGCTCGCCCCCATGGCAGCGTCGGC
Internal bar code:CAGGAGGGTGAACGGCATGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGCTAGTATGCGTGCGG
Suggested primer 2:CAGACAGACGAGTCAAGCGA