Insertion junction: CLIP2.010740_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010740
Chromosome:chromosome 2
Location:6544940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389100 GOT1 (1 of 3) PF04178 - Got1/Sft2-like family (Got1); Got1, COPII vesicle component intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATTATCACTTGCAACTAACGCCTCTACCTGTGCTCCGCTCCTTTTACC
Internal bar code:CTCAACGGATCTTTACTCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:102
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCTCGAAGCATACGGC
Suggested primer 2:CCATGTATGCGCCCCAAATG