Insertion junction: CLIP2.010740_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010740
Chromosome:chromosome 2
Location:6544942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389100 GOT1 (1 of 3) PF04178 - Got1/Sft2-like family (Got1); Got1, COPII vesicle component intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGATGGGGGCCGAGGCGTCGTGGAGTAGCAGGGCGAGCGGCGCCCGG
Internal bar code:CTCAACGGATCTTTACTCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2348
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTATGCGCCCCAAATG
Suggested primer 2:TGATCCTCGAAGCATACGGC