Insertion junction: CLIP2.010768_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010768
Chromosome:chromosome 12
Location:2933541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502400 (1 of 1) PTHR23423:SF17 - PROTEIN F40E10.6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCGACAAAAGTGGGGTTCGGGGCGTTGCTTAGGCTGGCTTGTAACGG
Internal bar code:ATCGCGCCACATTGGTACTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCACACTGCATCGCTCA
Suggested primer 2:TTTGCGCCTGCTGTTTCTTC