Insertion junction: CLIP2.010786_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010786
Chromosome:chromosome 3
Location:8380829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198800 (1 of 1) PTHR24078:SF169 - DNAJ HOMOLOG SUBFAMILY C MEMBER 17 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTGAGGCTGGCATCGCTCGCGGAACGCGACTGGTACACGAGAGGCGC
Internal bar code:AACGCTCTAGATTGTGAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2168
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTTATGCGTGTAGCCG
Suggested primer 2:GGCTCACCAGACTTCTGCAT