Insertion junction: CLIP2.010786_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010786
Chromosome:chromosome 3
Location:8380834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198800 (1 of 1) PTHR24078:SF169 - DNAJ HOMOLOG SUBFAMILY C MEMBER 17 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCTGGATGTTCCTTCGTTTCCGGCGCTGACCGCGCAGGTTCTGCCGC
Internal bar code:AACGCTCTAGATTGTGAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCACCAGACTTCTGCAT
Suggested primer 2:GCACTTTATGCGTGTAGCCG