Insertion junction: CLIP2.010790_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010790
Chromosome:chromosome 6
Location:8170374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00083299

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTGTGTACACCTTGTGTGTGTGTTGGGTTTTGTGGTATCGAGACGC
Internal bar code:AAGTAAGTCTACGGGTGAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:6127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAGATAGAACCCGACCG
Suggested primer 2:CTCTCTCTCCAGCCCTTCCT