Insertion junction: CLIP2.010798_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010798
Chromosome:chromosome 12
Location:3847649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515050 HLM18,SET4 putative N-methyltransferase; (1 of 1) PTHR13793:SF5 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX4-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCTCAGCCTTCCCTCGCCGGCGTGACGGTGCTTCAATGCTGGGCACG
Internal bar code:GACGGACTGTCACTGGAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGTTGAAGGTTGGCCTG
Suggested primer 2:CGGATTTTTGTGCGTGTGGT