Insertion junction: CLIP2.010798_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010798
Chromosome:chromosome 12
Location:3847652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515050 HLM18,SET4 putative N-methyltransferase; (1 of 1) PTHR13793:SF5 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX4-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTATCTAACTCCCCAACCGCCTCAGTGCATGAGACACGTGCATCCAG
Internal bar code:TCTGTTTTTGGGTATGGGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3406
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATTTTTGTGCGTGTGGT
Suggested primer 2:GCAAGTTGAAGGTTGGCCTG