Insertion junction: CLIP2.010803_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010803
Chromosome:chromosome 9
Location:878896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403450 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCGGGCGGGATTTGCTGGGCACCCCTATCTATTGACAAGCTGACAGA
Internal bar code:GTTCTCTCTGATTATTTGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3335
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCGCAACTCAAGTGAA
Suggested primer 2:TAGCCTGAGGTGTTGCAGTG