Insertion junction: CLIP2.010803_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010803
Chromosome:chromosome 9
Location:3592880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396698 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre09.g396735 (1 of 1) PTHR18895:SF3 - METHYLTRANSFERASE-LIKE PROTEIN 20 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGAAGCGGAGATAGATAGCTAGACAGCTGGATAGTTGGGCTGGCAGTT
Internal bar code:CGGGCCCTAGCTATTGGGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACATTGCTGCTGTTGAA
Suggested primer 2:GCGTGCATGGTCAGTAGACT