Insertion junction: CLIP2.010803_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010803
Chromosome:chromosome 9
Location:3592881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396698 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre09.g396735 (1 of 1) PTHR18895:SF3 - METHYLTRANSFERASE-LIKE PROTEIN 20 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGATGACCGCCCACTGCTGGTGCGTCTTGACCACGAAGTCCTGGAAT
Internal bar code:AGGGGATTTAGATAGGGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCATGGTCAGTAGACT
Suggested primer 2:GCCACATTGCTGCTGTTGAA