Insertion junction: CLIP2.010807_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010807
Chromosome:chromosome 3
Location:2122614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156700 FAP185,Nphp3 (1 of 2) IPR011990//IPR013026//IPR019734 - Tetratricopeptide-like helical domain // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Flagellar Associated Protein 185 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCGTGCGAGCACTTGATGAGTGTTTGTGTGCATATATATGTGTGTG
Internal bar code:GAGGCCACGAGGGTGAAGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGGCCGACAAGGAGAA
Suggested primer 2:GATGGGCACTGGATTGGTGA