Insertion junction: CLIP2.010811_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010811
Chromosome:chromosome 17
Location:528199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699400 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACCGCGCAGTCAATACGGTAATTCGCAGAGAACCTGCAATTTCCAGG
Internal bar code:TAGGGAAGTGCCGGGTGGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2052
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTCACCCTTACGCCAAC
Suggested primer 2:ATCTGTCCCGTTGAGCACAG